Founder effect & derivative · explained

🧬 Q.1 Founder effect · genetic drift biology

Which one of the following processes causes the ‘Founder effect’ in a population?
1. Genetic drift 2. Natural selection 3. Genetic recombination 4. Mutations

🌱 What is Founder effect? — A small group breaks away from a big population, carrying only a fraction of the genetic diversity. Allele frequencies in the new colony are randomly different from the original. That random change is the signature of genetic drift.

🎲 KEY INSIGHT: “purely due to chance” = GENETIC DRIFT

Founder effect is a special case of genetic drift (like bottleneck effect). It’s not about adaptation, survival, or new mutations — just sampling error when a few individuals start a new population.

🚫 Why other options are incorrect:

  • ❌ Natural selection → non‑random, based on fitness. Founder effect is random.
  • ❌ Genetic recombination → reshuffles alleles (meiosis), but doesn’t change overall frequencies by random sampling.
  • ❌ Mutations → create new alleles, not just change frequencies of existing ones.
🔥 Final takeaway: Founder effect = small group + random sampling → genetic drift
✅ Correct option: 1. Genetic drift

📐 Q.2 Derivative of x·logₑ(x) calculus

The derivative of x〖log⁡〗_e (x) is
1. 1 2. e^x 3. 0 4. 1+〖log⁡〗_e (x)

📘 First, recognise: 〖log⁡〗_e (x) = ln x. So we differentiate x·ln x.

d/dx [ x · ln x ] = (derivative of x) · ln x + x · (derivative of ln x)
= 1 · ln x + x · (1/x)
= ln x + 1    →    1 + ln x

🔍 Step‑by‑step:

  • Product rule (u·v)' = u'v + uv'
  • u = x → u' = 1
  • v = ln x → v' = 1/x
  • = 1·ln x + x·(1/x) = ln x + 1

🧠 Common pitfalls — why others are wrong:

  • Option 1 (1) → forgot the ln x part, treated as derivative of x only.
  • Option 2 (e^x) → confused ln x with e^x. d(ln x)/dx = 1/x, not e^x.
  • Option 3 (0) → treating x ln x as constant — impossible, function changes with x.
✅ Correct simplified form: 1 + ln x (same as 1+〖log⁡〗_e (x))
Extra insight: setting derivative = 0 gives ln x = –1 → x = e⁻¹, important in optimisation.

🎯 memory anchors

Founder effect → “few colonists by chance” → genetic drift (random). Not selection, not mutation.

x ln x derivative → product rule always: (1)(ln x) + x(1/x) = ln x + 1. No shortcuts!

📌 Exams test if you mix up random vs directed evolution, and product rule vs simple log derivative.

Membrane transport & second messengers · solved

⚡ Q.3 ATP-dependent transporter cell biology

Which one of the following classes of membrane protein requires ATP for transport of some species of molecules across the cellular membranes?
1. Pumps 2. Symporters 3. Antiporters 4. Ion channels

🧠 Core concept – active vs passive

🔹 Passive transport = no ATP, down gradient (like sliding).
🔹 Active transport = needs energy, against gradient. But only primary active uses ATP directly.

Pumps directly hydrolyse ATP → move ions/molecules uphill.
e.g. Na⁺/K⁺‑ATPase, Ca²⁺ pump.
Without ATP → pump stops.

❌ Why others are wrong:

  • Symporters (2) – secondary active transport; use ion gradient (e.g. Na⁺‑glucose). They don’t bind ATP.
  • Antiporters (3) – also secondary active; move opposite directions using gradient energy. No ATP hydrolysis.
  • Ion channels (4) – passive (facilitated diffusion). Ions move through pores according to electrochemical gradient. Like doors – they open, but don't push.
Protein classATP used directly?transport type
Pumps✅ YESprimary active
Symporters❌ nosecondary active
Antiporters❌ nosecondary active
Ion channels❌ nopassive
🎯 Memory anchor: Pumps = parents earning ATP 💼 ; sym/antiporters = kids spending the gradient 💳.
✅ Correct: 1 — Pumps

📨 Q.4 Second messenger? signaling

Which one of the following is NOT a second messenger in mammalian cells?
1. Calcium ion 2. Cyclic AMP 3. Potassium ion 4. Diacyl glycerol

📡 What is a second messenger? — intracellular small molecule/ion produced after receptor activation, relays & amplifies signal.

First messenger (hormone) → receptor → second messenger (cAMP, Ca²⁺, DAG, IP₃ …) → cellular response.

✅ Classic second messengers: Ca²⁺, cAMP, DAG, IP₃, cGMP, NO.

🔍 per option:

  • 1. Calcium ion — YES, released from ER, binds calmodulin, triggers contraction/secretion.
  • 2. Cyclic AMP — YES, prototypical second messenger (from ATP via adenylyl cyclase), activates PKA.
  • 4. Diacyl glycerol (DAG) — YES, from PIP₂ breakdown, activates PKC, stays in membrane.
  • 3. Potassium ion (K⁺) — ❌ NOT a second messenger. Maintains resting potential, involved in electrical signalling but not produced as a signal amplifier inside the cell.
⚠️ Why students pick wrong?
- Thinking “all ions = second messengers” — but only Ca²⁺ is specifically regulated and acts as a messenger.
- Overlooking the word “NOT”; they mark cAMP (which IS a messenger).
- Confusing electrical role (K⁺ in action potentials) with biochemical second messenger role.
MoleculeSecond messenger?Role
Ca²⁺✅ yesactivates calmodulin, enzymes
cAMP✅ yesPKA activation, gene regulation
DAG✅ yesPKC activation
K⁺❌ nomembrane potential, repolarisation
🪑 Analogy: Second messengers = company's internal broadcast system (WhatsApp group 📢).
Potassium = office furniture — important, but doesn't relay messages.
✅ NOT a second messenger: 3 — Potassium ion
🏁 final answers : Q.3 → Pumps (1)    |    Q.4 → Potassium ion (3)

📋 exam cheat sheet – membrane & signaling

🔋 ATP users (direct)

  • Pumps (Na⁺/K⁺, Ca²⁺ ATPase)
  • ATPases / transport ATPases

🚫 No direct ATP

  • Symporters, Antiporters
  • Ion channels (always passive)

📨 second messengers

  • cAMP, cGMP, Ca²⁺, IP₃, DAG, NO
  • K⁺ is NOT one

‼️ trap word “NOT” changes everything – circle it in exams.

Second derivative & essential amino acid · solutions

📐 Q.5 d²y/dx² of 15cos x – 13sin x calculus

If y(x) = 15cos(x) – 13sin(x), then (d²y)/(dx²) will be
1. π/y 2. 2 3. –y 4. y²/x

🧠 Step 1 – recognise the pattern

Function is a linear combo of sine and cosine. Their second derivatives are the negative of themselves:

d²/dx² (sin x) = –sin x    d²/dx² (cos x) = –cos x

✏️ Step 2 – first derivative
y = 15cos x – 13sin x
dy/dx = 15(–sin x) – 13(cos x) = –15sin x – 13cos x
✏️ Step 3 – second derivative
d²y/dx² = –15cos x + 13sin x
Factor –1 : = –(15cos x – 13sin x) = –y

🎯 result: d²y/dx² = –y → option 3 ✅

❌ Why others are wrong:
  • π/y – π never appears; no division.
  • 2 – constant only if y were quadratic; trig derivatives aren’t constant.
  • y²/x – no squares or x‑division emerge from differentiating sin/cos.
🌊 SHM connection: y'' = –y is the harmonic oscillator equation — sine and cosine are nature’s favourite oscillators.
✅ correct : 3. –y

🧪 Q.6 non‑essential amino acid biochemistry

Which one of the following is NOT an essential amino acid?
1. Threonine 2. Valine 3. Tryptophan 4. Tyrosine

🧠 Essential = cannot be synthesised by body → must come from diet.

The 9 essentials: Histidine, Isoleucine, Leucine, Lysine, Methionine, Phenylalanine, Threonine, Tryptophan, Valine.

Notice tyrosine is missing – it’s made from phenylalanine.

Amino acidEssential?Reason
Threonine✅ Yescannot be synthesised
Valine✅ YesBCAA, must eat
Tryptophan✅ Yesprecursor of serotonin
Tyrosine❌ Nosynthesised from phenylalanine
🧪 Why tyrosine is non‑essential (normally):
Tyrosine is formed by hydroxylation of phenylalanine. If you have enough phenylalanine (essential), the body makes tyrosine. That’s why it’s conditionally essential only in disorders like PKU.
⚠️ Common mistakes:
  • Assuming all aromatic amino acids are essential (tryptophan is, but tyrosine isn’t).
  • Memorising list without logic – use mnemonic “PVT TIM HALL” (includes Phe, Val, Thr, Trp, Ile, Met, His, Arg?, Leu, Lys) – tyrosine absent.
  • Confusing “important” (tyrosine makes dopamine, hormones) with “essential”. Importance ≠ dietary essentiality.
🍽️ Grocery analogy: Essential amino acids = must buy at store 🛒; non‑essential = you can cook at home. Tyrosine = dish you make from phenylalanine (raw material from store).
✅ NOT essential : 4. Tyrosine

📋 exam recap

🔢 Q5 second derivative

  • y = A cos x + B sin x → y'' = –y
  • Always compare with original

🥚 Q6 essential amino acids

  • 9 essentials – learn “PVT TIM HALL”
  • Tyrosine made from Phe → not essential
  • Read carefully: “NOT”

🏁 final: Q5 → –y (opt 3) 🧪 Q6 → Tyrosine (opt 4)
E. coli membrane & Coenzyme A vitamin · solutions

🧫 Q.7 E. coli membrane microbiology

The most abundant phospholipid in E. coli plasma membrane is
1. Phosphatidyl ethanolamine 2. Phosphatidyl choline 3. Phosphatidyl serine 4. Phosphatidyl inositol

🧠 Step 1 – context: E. coli = prokaryote → membrane ≠ eukaryote

Major phospholipids in E. coli: Phosphatidylethanolamine (PE) (~70–80%), Phosphatidylglycerol, Cardiolipin.

Phosphatidylethanolamine (PE) is the dominant structural lipid → maintains curvature, fluidity, and stability.

❌ Why others are not abundant in E. coli:

  • 2. Phosphatidyl choline (PC) – most abundant in mammalian membranes; bacteria (especially E. coli) have very little PC. Classic eukaryote/prokaryote trap.
  • 3. Phosphatidyl serine (PS) – present in small amounts, often intermediate for PE synthesis. Not major.
  • 4. Phosphatidyl inositol (PI) – key signaling lipid in eukaryotes (IP₃/DAG pathway); bacteria rarely use PI as a bulk component.
LipidAbundance in E. coliTypical in eukaryotes?
Phosphatidylethanolamine70–80% (major)present, but not always dominant
Phosphatidylcholinevery low / absentdominant in mammalian membranes
Phosphatidylserineminorsmall amount, signalling
Phosphatidylinositolraresignalling hub
🏭 Analogy: Human cell = luxury apartments (PC everywhere); E. coli = industrial workshop (PE does the heavy lifting). Different lifestyle → different lipid.
✅ correct : 1. Phosphatidyl ethanolamine

🧪 Q.8 Coenzyme A – vitamin source biochemistry

Coenzyme A is a co-factor of vitamin
1. Riboflavin 2. Pyridoxine 3. Folic acid 4. Pantothenic acid

🧠 Core fact: coenzymes are often vitamin derivatives. Coenzyme A (CoA) is derived from pantothenic acid (vitamin B5).

CoA is central to metabolism: acetyl‑CoA formation, fatty acid oxidation, TCA cycle, etc. Its structure includes pantothenic acid + ADP + cysteamine.

🔬 Vitamin – coenzyme mapping:
B5 (pantothenic acid) → Coenzyme A
B2 (riboflavin) → FAD, FMN
B6 (pyridoxine) → PLP
B9 (folic acid) → THF

❌ Distractor breakdown:

  • 1. Riboflavin (B2) – forms FAD/FMN (redox cofactors), not CoA.
  • 2. Pyridoxine (B6) – forms PLP (amino acid metabolism), unrelated to CoA.
  • 3. Folic acid (B9) – forms tetrahydrofolate (one‑carbon transfer), not CoA.
  • 4. Pantothenic acid (B5) – direct precursor of CoA → correct.
VitaminCoenzyme formMain function
Riboflavin (B2)FAD, FMNredox, ETC
Pyridoxine (B6)PLPtransamination, decarboxylation
Folic acid (B9)THFone‑carbon transfer, DNA synthesis
Pantothenic acid (B5)Coenzyme Aacyl group transfer, metabolism
🧠 Mnemonic: “Pantothenic” → “Pants” → “Coats” → CoA. Or simply: B5 = CoA = Fat metabolism.
✅ correct : 4. Pantothenic acid

📋 exam nutshell

🦠 E. coli membrane

  • ~75% Phosphatidylethanolamine
  • PC, PS, PI are minor / eukaryotic
  • trap: don’t pick phosphatidylcholine

💊 Coenzyme A vitamin

  • Pantothenic acid (B5) → CoA
  • B2 → FAD, B6 → PLP, B9 → THF
  • straight cofactor mapping

✅ Q7 → Phosphatidyl ethanolamine (1) ✅ Q8 → Pantothenic acid (4)
Electron Gain Enthalpy – Halogens order · explained

⚛️ Q.9 Electron Gain Enthalpy order periodic trends

Which one of the following is the correct decreasing order for the magnitude of Electron Gain Enthalpy (ΔegH) for the elements given below?
1. Br > Cl > At > I 2. I > Br > Cl > At 3. Cl > Br > I > At 4. At > Br > Cl > I

🧠 Step 1 – Understand “magnitude of electron gain enthalpy”

Electron gain enthalpy (ΔegH) is usually negative (energy released). “Magnitude” means we compare the absolute value (how much energy is released). More negative → larger magnitude.

📉 General trend in group 17 (halogens): as we move down, atomic size increases, nuclear attraction for the incoming electron decreases → ΔegH becomes less negative.
Expected order (ignoring fluorine exception): Cl > Br > I > At.

🧪 Why chlorine has the highest magnitude among these four:

  • Cl (small size, strong nuclear pull, 3p orbital) → releases most energy upon gaining electron.
  • Br (larger than Cl, 4p) → less energy released.
  • I (even larger, 5p) → lower magnitude.
  • At (very large, radioactive, 6p, high shielding) → least negative, smallest magnitude.
❌ Why other options fail:
  • Br > Cl > At > I (opt 1) – incorrect because Cl has higher magnitude than Br. First comparison itself is wrong.
  • I > Br > Cl > At (opt 2) – reverses the group trend (says electron gain enthalpy increases down the group).
  • At > Br > Cl > I (opt 4) – Astatine is the largest, least attraction → cannot be highest. Opposite of actual order.
ElementAtomic size trendElectron gain enthalpy magnitude
Cl (Chlorine)smallest among thesehighest (most negative)
Br (Bromine)larger than Cl▼ decreases
I (Iodine)even larger▼ further down
At (Astatine)largest, high shieldinglowest magnitude
📞 Analogy – nuclear call centre:
Chlorine: “Come here! I’ve been waiting!” (strong attraction)
Bromine: “Yeah okay, come if you want.” (weaker)
Iodine: “Hmm… fine.”
Astatine: “Who even are you?” (almost indifferent) 😄
So order: Cl > Br > I > At.
✅ correct : 3. Cl > Br > I > At

📊 Periodic pulse – halogen electron gain enthalpy

✅ correct order (magnitude)

  • Cl > Br > I > At
  • Fluorine (not here) would be between Cl and Br due to small size repulsion.

🚫 common mistakes

  • Confusing electronegativity with electron gain enthalpy
  • Blindly saying “increases up the group” without checking actual values
  • Forgetting “magnitude” → mixing up signs

🧪 Halogens: ΔegH magnitude order → Cl ➔ Br ➔ I ➔ At
🏁 Q.9 final answer: Option 3 – Cl > Br > I > At
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